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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THYM rs10056008 chr5:176621148 C/T LOC388955 chr2:63849182-63850159:- -0.55 -7.28 9.78E-11 Box Plot
THYM rs10056655 chr5:176676351 T/C LOC388955 chr2:63849182-63850159:- 0.8 11.54 9.08E-20 Box Plot
THYM rs10063803 chr5:176667327 C/A LOC388955 chr2:63849182-63850159:- 0.6 8.76 7.25E-14 Box Plot
THYM rs10068127 chr5:176631787 G/T LOC388955 chr2:63849182-63850159:- -0.81 -11.11 7.09E-19 Box Plot
THYM rs10072499 chr5:176655237 T/G LOC388955 chr2:63849182-63850159:- -0.8 -11.52 1.0E-19 Box Plot
THYM rs10121296 chr9:78893476 C/T DARS chr2:136664247-136743670:- 1.24 7.24 1.15E-10 Box Plot
THYM rs10125154 chr9:78893805 T/C DARS chr2:136664247-136743670:- 1.24 7.24 1.15E-10 Box Plot
THYM rs10476217 chr5:176559735 G/C LOC388955 chr2:63849182-63850159:- -0.63 -8.49 2.74E-13 Box Plot
THYM rs10476219 chr5:176628548 A/G LOC388955 chr2:63849182-63850159:- -0.55 -7.83 7.02E-12 Box Plot
THYM rs10498007 chr2:214345142 C/T TFF2 chr21:43766466-43771237:- -0.66 -7.54 2.81E-11 Box Plot
THYM rs1052432 chr5:176564189 G/A LOC388955 chr2:63849182-63850159:- -0.71 -10.27 4.4E-17 Box Plot
THYM rs10591465 chr5:176557460 CAT/C LOC388955 chr2:63849182-63850159:- -0.84 -12.93 1.18E-22 Box Plot
THYM rs10814410 chr9:46587 A/G WASH5P chr19:60951-71626:- 0.65 8.03 2.56E-12 Box Plot
THYM rs10833144 chr11:19656452 C/T TFF2 chr21:43766466-43771237:- 0.74 7.31 8.5E-11 Box Plot
THYM rs10876864 chr12:56401085 G/A RPS26P11 chrX:71264395-71264742:+ -0.73 -7.16 1.69E-10 Box Plot